NovaNexus

What Novarna can design — and where it applies.

NovaEngine™ is a generalist RNA design system built to address the most complex molecular targets across disease areas. The partner model puts it directly in your hands.

How we got here

From structure prediction to generative design. Built in the lab, not just on paper.

Novarna’s capabilities have been built iteratively, validated at each stage before advancing. Every generation of NovaEngine adds a new design capability, and the data it generates feeds the next.

  1. V3
    Structure prediction
    Outperforms Evo2
  2. 1.0Validated
    Generative design
    4 platforms · patent pending
  3. NX
    Nexus — in development
    Aptamer + SHAPE/SELEX
NovaEngine

RNA tertiary structure prediction

Outperforms Evo2 across all 6 RNA classes (p < 0.01). NovaFM enables faster, more efficient predictions than models trained on trillions of nucleotides.

NovaEngine 1.0

4 validated therapeutic platforms

Generative design across circRNA sponge delivery, miRNA degraders, TDcircRNA protein degradation, and aptamers — all confirmed in wet lab conditions.

NovaEngine Nexus · In development

Aptamer design + SHAPE/SELEX integration

Integrates aptamer design and experimental data into the AI model — turning aptamer screening into AI-guided engineering.

Our platform

Two systems. One integrated design loop.

NovaEngine and NovaLab™ form a closed feedback loop that gets smarter with every experiment. The lab generates proprietary data that retrains the AI — and the AI designs better candidates for the lab to validate.

NovaEngine

  • AI design system
  • 4th-gen generative AI
DesignsNovel sequences →
Learns← Proprietary SHAPE/SELEX data retrains AI

NovaLab

  • Wet lab validation
  • SHAPE · SELEX · in vitro
Why Novarna

Three things no other RNA design platform does together.

01

We generate sequences — we don’t screen for them.

Traditional platforms screen sequences from existing libraries. NovaEngine generates novel RNA from scratch — fewer candidates, faster cycles, lower cost per program.

02

Our AI learns from our own lab data — not just public datasets.

NovaLab generates proprietary experimental data that retrains NovaEngine with every cycle. No external dataset can replicate it. Every program makes the platform more accurate.

03

Your target. Your indication. Our modality platform.

Partners come to Novarna with a biological target and a disease indication. We identify the right non-coding RNA modality from our platform: microRNA sponges, aptamers, aptamer drug conjugates, targeted protein degradation. The platform adapts to the therapeutic challenge, not the other way around.

Novel capability

Multifunction RNA design.

Most RNA therapeutics are designed to do a single thing. Novarna designs molecules that do several — packaged inside a single circular RNA structure. This is possible because RNA is structurally modular: individual functional units can be linked together, each folding and operating independently. Nature already works this way. Until now, designing multi-module RNA structures reliably has been beyond reach. NovaEngine makes it an engineering problem rather than a guessing game.

Demonstrated in the lab

NovaEngine designed circular RNA with multiple therapeutic functions in one structure. In lab testing, those designs found and eliminated a disease-driving protein inside cancer cells. Precision design at the molecular level.

RNA’s inherent modularity is what makes this possible. Unlike proteins or synthetic small molecules, RNA structures can be engineered as independent building blocks, linked together into one deliverable molecule. Each function operates without interfering with the next. And because RNA is a natural molecule that the cell already knows how to use, it interfaces with biology in a way a foreign synthetic compound never can. NovaEngine is the design tool that makes this engineering possible.

Provisional patent filedWet lab confirmed
DEGRADERBINDERANCHORPAYLOADCIRCULAR RNAMultifunction scaffold
Where we apply the platform

From oncology to rare genetic disorders — we design for the hardest targets.

Oncology

Designing smarter against the signals that drive cancer.

Novarna designs RNA that intercepts the signals cancer cells use to grow and resist treatment, validated against a commercial benchmark in ovarian cancer models at the University of Michigan. The designs outperformed a commercially available treatment.

Best fit: programs targeting specific cancer-driving genes or proteins.

Confirmed PoC
Rare genetic disorders

Precision design for conditions too rare for traditional screening.

Rare disease programs require highly specific solutions — and rarely have the scale for years of trial-and-error. Novarna designs directly to the target. Discovery time drops from years to months. Every design is built for that target specifically, not adapted from a library of approximate sequences.

Best fit: programs where existing tools have stalled or the target is too specific to screen by hand.

In development
Cardiovascular disease

Stable, targeted RNA candidates for cardiovascular programs.

Cardiovascular programs need RNA candidates that are stable in the body and tissue-specific. Novarna designs to those specifications from day one — reducing the time spent optimizing later.

Best fit: programs targeting lipid pathways, cardiac inflammation, or fibrosis.

In development
Neurological disorders

Designed for one of the hardest environments in the human body.

The brain is difficult to reach and unforgiving of imprecision. Novarna designs RNA candidates built specifically for that environment — structurally optimized for a single target, not a broad category.

Best fit: programs targeting neurodegeneration, gene silencing in the CNS, or intracellular proteins.

In development
Aptamer discovery

Faster aptamer leads — designed by AI, confirmed in the lab.

Traditional aptamer screening takes months of iterative lab work. Novarna generates and ranks candidates computationally first, then confirms the best in our wet lab — delivering leads in weeks, not months. The modality is adaptable, covering aptamers, aptamer drug conjugates, or combinations designed for your specific target.

Best fit: programs needing a high-affinity binder to a specific protein target.

In development

Have a target not listed here?

NovaEngine is a generalist design system. If you have a target, we’d like to evaluate fit.

The research partner model

We work inside your program — not alongside it.

Novarna embeds our design system directly into your research workflow — from target definition through candidate delivery — through a structured partnership model that scales with your program’s needs.

↺ Lab data retrains NovaEngine — every experiment improves the model

  1. 1

    Define design parameters

    Partner works with NovaLab to define target parameters, therapeutic goals, and design constraints.

  2. 2

    AI generates candidate designs

    NovaEngine generates novel RNA sequences optimized to your target — not screened from a library, but designed from scratch.

  3. 3

    NovaLab synthesizes and screens

    NovaLab synthesizes candidates and runs preliminary screening, or works with your lab to test in your existing assays.

  4. 4

    Results feed back into NovaEngine ↺

    Experimental results retrain the AI — every iteration improves model accuracy for your program and future programs.

  5. 5

    Partner licenses optimized candidates

    You license the AI-designed candidates for further development and commercialization, with milestone and royalty structures aligned to your program.

Have a target?

Let’s design for it.

Our science team works directly with research partners to evaluate target fit and scope a program.

View validation data